STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3310Dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase family 2; GtrA family protein; KEGG: rpc:RPC_1645 dolichyl-phosphate beta-D-mannosyltransferase. (394 aa)    
Predicted Functional Partners:
Xaut_1362
PFAM: glycosyl transferase family 39; KEGG: acr:Acry_0867 glycosyl transferase, family 39.
  
 0.943
Xaut_1363
PFAM: glycosyl transferase family 2; GtrA family protein; KEGG: rpe:RPE_1674 dolichyl-phosphate beta-D-mannosyltransferase.
 
 
0.941
Xaut_4553
PFAM: glycosyl transferase family 2; KEGG: nha:Nham_2075 glycosyl transferase, family 2.
 
 
0.931
Xaut_3811
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20832 putative cell surface polysaccharide export ABC-2 transporter ATP-binding protein.
  
  
 0.630
Xaut_2352
PFAM: glycosyl transferase family 2; KEGG: rpb:RPB_1844 glycosyl transferase, family 2.
 
  
 0.597
Xaut_3810
PFAM: ABC-2 type transporter; KEGG: sme:SMb20822 putative cell surface polysaccharide export ABC-2 transporter permease protein, close relative to wzm1Y20833.
  
  
 0.585
Xaut_4551
PFAM: glycosyl transferase family 39; KEGG: rpe:RPE_2724 glycosyl transferase, family 39.
 
  
 0.541
Xaut_3550
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: gox:GOX0455 mannose-6-phosphate isomerase.
  
  
 0.526
Xaut_3309
KEGG: syw:SYNW0189 hypothetical protein.
       0.514
Xaut_2014
KEGG: rpe:RPE_0035 phosphoesterase, PA-phosphatase related.
 
  
 0.487
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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