STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3379PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_1216 binding-protein-dependent transport systems inner membrane component. (295 aa)    
Predicted Functional Partners:
Xaut_3377
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rpb:RPB_0219 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.
  
 0.997
Xaut_3378
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bja:bll7918 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.996
Xaut_2764
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bja:bll0990 peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.989
Xaut_2765
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa2079 probable ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.989
Xaut_3380
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0224 binding-protein-dependent transport systems inner membrane component.
  
 0.985
Xaut_4657
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bra:BRADO6820 putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.985
Xaut_2636
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bra:BRADO1006 putative oligopeptide transport protein (ABC superfamily, atp_bind); Belongs to the ABC transporter superfamily.
  
 0.978
Xaut_2762
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4253 binding-protein-dependent transport systems inner membrane component.
  
 0.949
Xaut_3381
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: bja:bll7921 ABC transporter substrate-binding protein.
 
 0.943
Xaut_4659
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1472 putative dipeptide transport permease protein.
  
 0.929
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.