STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3640KEGG: stt:t1882 putative bacteriophage protein. (138 aa)    
Predicted Functional Partners:
Xaut_3641
KEGG: sty:STY1060 putative bacteriophage protein.
       0.773
Xaut_3636
KEGG: bvi:Bcep1808_4537 putative bacteriophage protein.
       0.653
Xaut_3639
KEGG: bvi:Bcep1808_4542 hypothetical protein.
       0.641
Xaut_3634
Hypothetical protein.
       0.628
Xaut_3635
KEGG: reu:Reut_A2396 putative bacteriophage protein.
       0.628
Xaut_3637
TIGRFAM: phage head-tail adaptor, putative; KEGG: reu:Reut_A2398 putative bacteriophage protein.
       0.628
Xaut_3638
KEGG: reu:Reut_A2399 putative bacteriophage protein.
       0.628
Xaut_3633
KEGG: reu:Reut_A2394 putative bacteriophage protein.
       0.543
Xaut_3642
KEGG: reu:Reut_A2403 hypothetical protein.
       0.456
Xaut_3643
KEGG: reu:Reut_A2403 hypothetical protein.
       0.456
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.