STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3761PFAM: Invasion associated locus B family protein; KEGG: nha:Nham_0726 invasion associated locus B. (183 aa)    
Predicted Functional Partners:
Xaut_3757
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo3513 putative aliphatic sulfonates transport system,ATP-binding protein.
       0.513
Xaut_3758
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_1933 probable permease of ABC transporter.
       0.513
Xaut_3759
TIGRFAM: Xanthine dehydrogenase small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: csa:Csal_1789 molybdopterin dehydrogenase, FAD-binding.
       0.513
Xaut_3760
TIGRFAM: Xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMb21287 putative xanthine dehydrogenase protein.
       0.513
Xaut_3756
PFAM: Glutathione S-transferase domain; KEGG: xac:XAC1474 glutathione S-transferase.
       0.430
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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