Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Xaut_4032 | Xaut_4033 | PFAM: amino acid permease-associated region; KEGG: atc:AGR_C_3885 hypothetical protein. | PFAM: Ethanolamine ammonia-lyase light chain; KEGG: bpd:BURPS668_3938 ethanolamine ammonia-lyase, light subnit; Belongs to the EutC family. | 0.785 |
Xaut_4032 | Xaut_4034 | PFAM: amino acid permease-associated region; KEGG: atc:AGR_C_3885 hypothetical protein. | PFAM: Ethanolamine ammonia lyase large subunit; KEGG: asa:ASA_0956 ethanolamine ammonia-lyase, large subunit. | 0.781 |
Xaut_4032 | Xaut_4035 | PFAM: amino acid permease-associated region; KEGG: atc:AGR_C_3885 hypothetical protein. | PFAM: extracellular solute-binding protein family 3; KEGG: rde:RD1_1210 amino-acid ABC transporter, periplasmic binding protein. | 0.408 |
Xaut_4033 | Xaut_4032 | PFAM: Ethanolamine ammonia-lyase light chain; KEGG: bpd:BURPS668_3938 ethanolamine ammonia-lyase, light subnit; Belongs to the EutC family. | PFAM: amino acid permease-associated region; KEGG: atc:AGR_C_3885 hypothetical protein. | 0.785 |
Xaut_4033 | Xaut_4034 | PFAM: Ethanolamine ammonia-lyase light chain; KEGG: bpd:BURPS668_3938 ethanolamine ammonia-lyase, light subnit; Belongs to the EutC family. | PFAM: Ethanolamine ammonia lyase large subunit; KEGG: asa:ASA_0956 ethanolamine ammonia-lyase, large subunit. | 0.999 |
Xaut_4033 | Xaut_4035 | PFAM: Ethanolamine ammonia-lyase light chain; KEGG: bpd:BURPS668_3938 ethanolamine ammonia-lyase, light subnit; Belongs to the EutC family. | PFAM: extracellular solute-binding protein family 3; KEGG: rde:RD1_1210 amino-acid ABC transporter, periplasmic binding protein. | 0.545 |
Xaut_4034 | Xaut_4032 | PFAM: Ethanolamine ammonia lyase large subunit; KEGG: asa:ASA_0956 ethanolamine ammonia-lyase, large subunit. | PFAM: amino acid permease-associated region; KEGG: atc:AGR_C_3885 hypothetical protein. | 0.781 |
Xaut_4034 | Xaut_4033 | PFAM: Ethanolamine ammonia lyase large subunit; KEGG: asa:ASA_0956 ethanolamine ammonia-lyase, large subunit. | PFAM: Ethanolamine ammonia-lyase light chain; KEGG: bpd:BURPS668_3938 ethanolamine ammonia-lyase, light subnit; Belongs to the EutC family. | 0.999 |
Xaut_4034 | Xaut_4035 | PFAM: Ethanolamine ammonia lyase large subunit; KEGG: asa:ASA_0956 ethanolamine ammonia-lyase, large subunit. | PFAM: extracellular solute-binding protein family 3; KEGG: rde:RD1_1210 amino-acid ABC transporter, periplasmic binding protein. | 0.545 |
Xaut_4035 | Xaut_4032 | PFAM: extracellular solute-binding protein family 3; KEGG: rde:RD1_1210 amino-acid ABC transporter, periplasmic binding protein. | PFAM: amino acid permease-associated region; KEGG: atc:AGR_C_3885 hypothetical protein. | 0.408 |
Xaut_4035 | Xaut_4033 | PFAM: extracellular solute-binding protein family 3; KEGG: rde:RD1_1210 amino-acid ABC transporter, periplasmic binding protein. | PFAM: Ethanolamine ammonia-lyase light chain; KEGG: bpd:BURPS668_3938 ethanolamine ammonia-lyase, light subnit; Belongs to the EutC family. | 0.545 |
Xaut_4035 | Xaut_4034 | PFAM: extracellular solute-binding protein family 3; KEGG: rde:RD1_1210 amino-acid ABC transporter, periplasmic binding protein. | PFAM: Ethanolamine ammonia lyase large subunit; KEGG: asa:ASA_0956 ethanolamine ammonia-lyase, large subunit. | 0.545 |