STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4062ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: har:HEAR2680 putative high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) (partial match); Belongs to the binding-protein-dependent transport system permease family. (606 aa)    
Predicted Functional Partners:
Xaut_4061
PFAM: inner-membrane translocator; KEGG: har:HEAR2681 high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane); Belongs to the binding-protein-dependent transport system permease family.
  
 0.976
Xaut_4060
PFAM: Extracellular ligand-binding receptor; KEGG: har:HEAR2682 putative ABC-type branched-chain amino acid transport systems.
 
  
 0.943
Xaut_4063
PFAM: ABC transporter related; KEGG: reh:H16_A1709 ABC-type transporter, ATPase component: HAAT family.
 
  
0.922
Xaut_4054
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1837 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.896
Xaut_4053
PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A3706 ABC branched chain amino acid family transporter, periplasmic ligand binding protein.
 
  
 0.877
Xaut_1046
PFAM: inner-membrane translocator; KEGG: bbr:BB4292 branched-chain amino acid transport system permease.
  
 0.863
Xaut_1048
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB4294 branched-chain amino acid transport ATP-binding protein.
 
  
0.862
Xaut_0645
PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr3353 ABC transporter substrate-binding protein.
 
  
 0.849
Xaut_0644
PFAM: inner-membrane translocator; KEGG: bja:blr3354 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.846
Xaut_0046
PFAM: inner-membrane translocator; KEGG: sth:STH1615 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.839
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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