STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4192PFAM: periplasmic binding protein; KEGG: atc:AGR_C_4467 hemin-binding periplasmic protein HmuT precursor. (320 aa)    
Predicted Functional Partners:
hmuV
ABC transporter related; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.993
Xaut_4193
PFAM: transport system permease protein; KEGG: sru:SRU_2729 hemin ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.992
Xaut_2783
PFAM: transport system permease protein; KEGG: csa:Csal_1049 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.918
Xaut_4191
TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpc:RPC_1973 TonB-dependent haem/haemoglobin receptor.
  
 0.909
Xaut_2780
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypn:YPN_0698 ferrichrome transport ATP-binding protein FhuC.
 
 
 0.837
Xaut_4190
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bll7423 hypothetical protein.
 
     0.691
Xaut_4275
TIGRFAM: TonB family protein; KEGG: nwi:Nwi_2038 TonB like protein.
 
  
 0.497
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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