STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4210PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpb:RPB_1668 (2Fe-2S)-binding protein. (157 aa)    
Predicted Functional Partners:
Xaut_4209
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; cytochrome c class I; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rpb:RPB_1669 pyrroloquinoline-quinone aldehyde dehydrogenase.
 0.998
Xaut_0648
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bja:blr3350 probable carbon monoxide dehydrogenase large chain.
 
 0.988
Xaut_2916
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bcn:Bcen_3529 twin-arginine translocation pathway signal.
 
 0.978
Xaut_3760
TIGRFAM: Xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMb21287 putative xanthine dehydrogenase protein.
     0.971
Xaut_4211
KEGG: rpb:RPB_1667 hypothetical protein.
   
  0.943
Xaut_0647
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bja:blr3351 probable carbon monoxide dehydrogenase medium chain.
 
 0.934
Xaut_0349
Nicotinamidase; PFAM: isochorismatase hydrolase; KEGG: bte:BTH_I2143 pyrazinamidase/nicotinamidase.
  
 
 0.904
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.902
Xaut_3910
KEGG: rpd:RPD_1787 xanthine dehydrogenase accessory factor.
 
  
 0.821
Xaut_3909
PFAM: protein of unknown function DUF182; KEGG: sme:SMc00517 hypothetical protein.
 
  
 0.804
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.