STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4465TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: rpe:RPE_2963 protein of unknown function DUF59. (124 aa)    
Predicted Functional Partners:
Xaut_4466
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.918
Xaut_4468
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2839 FeS assembly ATPase SufC.
  
 0.911
Xaut_4467
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: bra:BRADO3543 SufD, needed for FhuF Fe-S center production/stability.
   
 0.891
Xaut_4469
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: bbt:BBta_3966 transport protein associated with Fe-S cluster assembly, SufB.
   
 0.806
Xaut_0085
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: bra:BRADO5446 ABC transporter associated with Fe-S cluster assembly, ATP binding protein.
  
 0.803
Xaut_0086
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: bra:BRADO5445 SufD, needed for FhuF Fe-S center production/stability.
   
 0.771
Xaut_0084
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: nwi:Nwi_1664 FeS assembly protein SufB.
   
 0.720
Xaut_0087
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.646
Xaut_4464
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_1272 glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.552
Xaut_1650
KEGG: rpd:RPD_3249 NifU-like protein.
  
    0.524
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.