STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4506Hypothetical protein. (130 aa)    
Predicted Functional Partners:
Xaut_4501
PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: hdu:HD1557 bacteriophage Mu GP30-like protein.
       0.778
Xaut_4502
PFAM: protein of unknown function DUF935; KEGG: rsq:Rsph17025_2101 protein of unknown function DUF935.
       0.773
Xaut_4503
PFAM: protein of unknown function DUF264; KEGG: mca:MCA2933 prophage MuMc02, terminase, ATPase subunit, putative.
       0.773
Xaut_4504
KEGG: mag:amb0473 Mu-like prophage FluMu protein GP27.
       0.773
Xaut_4505
Hypothetical protein.
       0.773
Xaut_4507
Hypothetical protein.
       0.773
Xaut_4508
Hypothetical protein.
       0.773
Xaut_4509
Hypothetical protein.
       0.773
Xaut_4510
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bbt:BBta_6577 hypothetical protein.
       0.773
Xaut_4500
TIGRFAM: phage virion morphogenesis protein; PFAM: virion morphogenesis (putative tail completion) protein; KEGG: hdu:HD1558 possible bacteriophage Mu G-like protein.
       0.439
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.