STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4538KEGG: mlo:mll0665 hypothetical protein. (114 aa)    
Predicted Functional Partners:
Xaut_3769
Phasin; TIGRFAM: phasin; KEGG: bbt:BBta_6819 hypothetical protein.
  
   
 0.785
Xaut_3584
KEGG: rpd:RPD_3048 hypothetical protein.
 
     0.694
Xaut_2567
Opacity protein and related surface antigens-like protein; KEGG: mes:Meso_3164 hypothetical protein.
  
     0.658
Xaut_2033
PFAM: protein of unknown function DUF1150; KEGG: bbt:BBta_0116 hypothetical protein.
  
     0.610
Xaut_1480
PFAM: protein of unknown function DUF423; KEGG: bra:BRADO0780 hypothetical protein.
  
     0.603
Xaut_3868
PFAM: Invasion associated locus B family protein; KEGG: bra:BRADO3777 conserved hypothetical protein; putative signal peptide.
  
     0.599
Xaut_3583
PFAM: AzlC family protein; KEGG: rpa:RPA3143 hypothetical protein.
 
     0.584
Xaut_1474
KEGG: mlo:mll1302 hypothetical protein.
  
     0.583
Xaut_4721
KEGG: rpa:RPA1995 hypothetical protein.
  
     0.580
Xaut_1453
KEGG: bja:blr1191 hypothetical protein.
  
     0.579
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.