STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4697Ferredoxin-dependent glutamate synthase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: ret:RHE_PE00419 glutamate synthase large subunit 2 protein; Belongs to the glutamate synthase family. (445 aa)    
Predicted Functional Partners:
Xaut_4696
KEGG: gbe:GbCGDNIH1_2112 glutamate synthase family protein.
 0.999
Xaut_4695
PFAM: glutamine amidotransferase class-II; KEGG: bra:BRADO5885 putative glutamine amidotransferase GATase, classII.
 
 0.997
Xaut_0917
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nca:Noca_0618 NADH:flavin oxidoreductase/NADH oxidase.
  
 0.979
Xaut_0476
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mlo:mll3029 glutamate synthase (NADPH) small chain.
 
 
 0.977
Xaut_4702
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: bbt:BBta_1947 sarcosine oxidase, alpha subunit.
 
 
 0.942
Xaut_4700
TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bbt:BBta_1949 sarcosine oxidase, beta subunit.
 
 
 0.931
Xaut_4701
PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: rpb:RPB_1142 sarcosine oxidase, delta subunit, heterotetrameric.
 
  
  0.922
Xaut_4703
PFAM: Sarcosine oxidase gamma subunit; KEGG: rpb:RPB_1144 sarcosine oxidase, gamma subunit.
 
  
  0.918
Xaut_4698
PFAM: glutamine synthetase catalytic region; KEGG: bra:BRADO5882 glutamine synthetase I.
 
  
 0.910
Xaut_0477
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bov:BOV_A0049 glutamate synthase, large subunit.
  
 
0.889
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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