STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4737PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bmb:BruAb2_0922 hypothetical protein. (196 aa)    
Predicted Functional Partners:
Xaut_4736
KEGG: nha:Nham_1745 hypothetical protein.
 
     0.914
Xaut_2552
KEGG: rpa:RPA4361 hypothetical protein.
  
     0.552
Xaut_1261
PFAM: Beta-ketoacyl synthase; KEGG: rpd:RPD_2088 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.547
Xaut_1263
PFAM: phosphopantetheine-binding; KEGG: bra:BRADO4675 acyl carrier protein.
 
     0.529
Xaut_2339
PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: rpe:RPE_1455 oxidoreductase domain protein.
 
   
 0.481
Xaut_4297
KEGG: rpc:RPC_2652 hypothetical protein.
  
     0.463
Xaut_1453
KEGG: bja:blr1191 hypothetical protein.
  
     0.426
Xaut_3318
KEGG: bja:bll3066 hypothetical protein.
  
     0.426
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.