STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BIGA_0534Response regulator DrrA. (256 aa)    
Predicted Functional Partners:
BIGA_0533
Integral membrane sensor signal transduction histidine kinase.
 
 0.978
BIGA_0496
Signal transduction histidine kinase.
 
 
 0.899
BIGA_0919
Sensor-like histidine kinase senX3.
 
 
 0.891
BIGA_1254
Putative histidine kinase.
 
 0.848
BIGA_1024
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
 0.847
BIGA_0102
Two-component histidine kinase.
 
 0.845
BIGA_1273
Two component system histidine kinase.
 
 
 0.842
BIGA_0624
Transcriptional regulator.
  
   0.622
BIGA_0532
ABC superfamily ATP binding cassette transporter, membrane protein.
       0.591
BIGA_0531
ABC transporter, ATP-binding protein Vexp2.
       0.475
Your Current Organism:
Bifidobacterium gallinarum
NCBI taxonomy Id: 78344
Other names: AS 1.2283, ATCC 33777, B. gallinarum, BCRC 14679, CCRC 14679, CCRC:14679, CCUG 34990, DSM 20670, JCM 6291, LMG 11586, LMG:11586, strain Ch206-5
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