Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BIGA_0855 | BIGA_0856 | BIGA_0855 | BIGA_0856 | LacI-type transcriptional regulator. | Ribulokinase. | 0.487 |
BIGA_0855 | BIGA_0857 | BIGA_0855 | BIGA_0857 | LacI-type transcriptional regulator. | L-ribulose-5-phosphate 4-epimerase. | 0.409 |
BIGA_0856 | BIGA_0855 | BIGA_0856 | BIGA_0855 | Ribulokinase. | LacI-type transcriptional regulator. | 0.487 |
BIGA_0856 | BIGA_0857 | BIGA_0856 | BIGA_0857 | Ribulokinase. | L-ribulose-5-phosphate 4-epimerase. | 0.835 |
BIGA_0856 | araA | BIGA_0856 | BIGA_0858 | Ribulokinase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.818 |
BIGA_0857 | BIGA_0855 | BIGA_0857 | BIGA_0855 | L-ribulose-5-phosphate 4-epimerase. | LacI-type transcriptional regulator. | 0.409 |
BIGA_0857 | BIGA_0856 | BIGA_0857 | BIGA_0856 | L-ribulose-5-phosphate 4-epimerase. | Ribulokinase. | 0.835 |
BIGA_0857 | BIGA_1413 | BIGA_0857 | BIGA_1413 | L-ribulose-5-phosphate 4-epimerase. | Xylulokinase. | 0.942 |
BIGA_0857 | adhE | BIGA_0857 | BIGA_0985 | L-ribulose-5-phosphate 4-epimerase. | Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.493 |
BIGA_0857 | araA | BIGA_0857 | BIGA_0858 | L-ribulose-5-phosphate 4-epimerase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.994 |
BIGA_0857 | rpe | BIGA_0857 | BIGA_0175 | L-ribulose-5-phosphate 4-epimerase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.914 |
BIGA_1413 | BIGA_0857 | BIGA_1413 | BIGA_0857 | Xylulokinase. | L-ribulose-5-phosphate 4-epimerase. | 0.942 |
BIGA_1413 | araA | BIGA_1413 | BIGA_0858 | Xylulokinase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.499 |
BIGA_1413 | rpe | BIGA_1413 | BIGA_0175 | Xylulokinase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.925 |
adhE | BIGA_0857 | BIGA_0985 | BIGA_0857 | Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | L-ribulose-5-phosphate 4-epimerase. | 0.493 |
adhE | rpe | BIGA_0985 | BIGA_0175 | Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.401 |
araA | BIGA_0856 | BIGA_0858 | BIGA_0856 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Ribulokinase. | 0.818 |
araA | BIGA_0857 | BIGA_0858 | BIGA_0857 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulose-5-phosphate 4-epimerase. | 0.994 |
araA | BIGA_1413 | BIGA_0858 | BIGA_1413 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Xylulokinase. | 0.499 |
rpe | BIGA_0857 | BIGA_0175 | BIGA_0857 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | L-ribulose-5-phosphate 4-epimerase. | 0.914 |
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