Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BMERY_0809Restriction modification system DNA specificity subunit. (432 aa)    
Predicted Functional Partners:
BMERY_0808
Type I site-specific restriction-modification system.
 
 
 0.961
BMERY_0826
N-6 DNA methylase.
 
 
 0.918
BMERY_0843
Type I restriction system adenine methylase HsdM.
 
 
 0.842
BMERY_0810
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
     0.840
BMERY_0842
HsdS specificity protein of type I restriction-modification system.
  
     0.734
BMERY_0971
N-6 DNA Methylase.
 
 
 0.722
BMERY_0811
Type I restriction-modification enzyme, S subunit.
 
    
0.664
BMERY_0823
Restriction endonuclease.
  
   0.643
BMERY_0837
HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.617
BMERY_0807
Peptidase E; Belongs to the peptidase S51 family.
       0.414
Your Current Organism:
Bifidobacterium merycicum
NCBI taxonomy Id: 78345
Other names: AS 1.2273, ATCC 49391, B. merycicum, CCUG 34976, DSM 6492, JCM 8219, LMG 11341, LMG:11341, strain Ru915B
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