STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMERY_0809Restriction modification system DNA specificity subunit. (432 aa)    
Predicted Functional Partners:
BMERY_0808
Type I site-specific restriction-modification system.
 
 
 0.975
BMERY_0826
N-6 DNA methylase.
 
 
 0.946
BMERY_0843
Type I restriction system adenine methylase HsdM.
 
 
 0.895
BMERY_0810
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
     0.841
BMERY_0971
N-6 DNA Methylase.
 
 
 0.817
BMERY_0823
Restriction endonuclease.
  
   0.757
BMERY_0842
HsdS specificity protein of type I restriction-modification system.
  
     0.734
BMERY_0811
Type I restriction-modification enzyme, S subunit.
 
    
0.665
BMERY_0837
HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.657
atpF
F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
   0.615
Your Current Organism:
Bifidobacterium merycicum
NCBI taxonomy Id: 78345
Other names: AS 1.2273, ATCC 49391, B. merycicum, CCUG 34976, DSM 6492, JCM 8219, LMG 11341, LMG:11341, strain Ru915B
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.