Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMERY_1088 | BMERY_1089 | BMERY_1088 | BMERY_1089 | ParA/MinD ATPase-like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Cation transporter protein. | 0.484 |
BMERY_1089 | BMERY_1088 | BMERY_1089 | BMERY_1088 | Cation transporter protein. | ParA/MinD ATPase-like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.484 |
BMERY_1089 | BMERY_1090 | BMERY_1089 | BMERY_1090 | Cation transporter protein. | ABC-type cobalt transport system, permease protein. | 0.442 |
BMERY_1089 | BMERY_1537 | BMERY_1089 | BMERY_1537 | Cation transporter protein. | 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokin ase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.459 |
BMERY_1089 | BMERY_1804 | BMERY_1089 | BMERY_1804 | Cation transporter protein. | H(+)-stimulated manganese uptake system protein. | 0.409 |
BMERY_1089 | ldh | BMERY_1089 | BMERY_0024 | Cation transporter protein. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.552 |
BMERY_1089 | ldh-2 | BMERY_1089 | BMERY_0304 | Cation transporter protein. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.552 |
BMERY_1090 | BMERY_1089 | BMERY_1090 | BMERY_1089 | ABC-type cobalt transport system, permease protein. | Cation transporter protein. | 0.442 |
BMERY_1537 | BMERY_1089 | BMERY_1537 | BMERY_1089 | 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokin ase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Cation transporter protein. | 0.459 |
BMERY_1804 | BMERY_1089 | BMERY_1804 | BMERY_1089 | H(+)-stimulated manganese uptake system protein. | Cation transporter protein. | 0.409 |
ldh | BMERY_1089 | BMERY_0024 | BMERY_1089 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | Cation transporter protein. | 0.552 |
ldh | ldh-2 | BMERY_0024 | BMERY_0304 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.914 |
ldh-2 | BMERY_1089 | BMERY_0304 | BMERY_1089 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Cation transporter protein. | 0.552 |
ldh-2 | ldh | BMERY_0304 | BMERY_0024 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.914 |