Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRUM_1095 | BRUM_1096 | BRUM_1095 | BRUM_1096 | ComEC/Rec2-like protein. | DNA polymerase III, subunit delta. | 0.762 |
BRUM_1095 | BRUM_1097 | BRUM_1095 | BRUM_1097 | ComEC/Rec2-like protein. | Putative ATP-binding protein. | 0.757 |
BRUM_1095 | BRUM_1098 | BRUM_1095 | BRUM_1098 | ComEC/Rec2-like protein. | Peptidase M22, glycoprotease family. | 0.687 |
BRUM_1095 | BRUM_1099 | BRUM_1095 | BRUM_1099 | ComEC/Rec2-like protein. | Ribosomal-protein-alanine N-acetyltransferase. | 0.630 |
BRUM_1095 | leuS | BRUM_1095 | BRUM_1093 | ComEC/Rec2-like protein. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.706 |
BRUM_1095 | tsaD | BRUM_1095 | BRUM_1100 | ComEC/Rec2-like protein. | Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.635 |
BRUM_1096 | BRUM_1095 | BRUM_1096 | BRUM_1095 | DNA polymerase III, subunit delta. | ComEC/Rec2-like protein. | 0.762 |
BRUM_1096 | BRUM_1097 | BRUM_1096 | BRUM_1097 | DNA polymerase III, subunit delta. | Putative ATP-binding protein. | 0.841 |
BRUM_1096 | BRUM_1098 | BRUM_1096 | BRUM_1098 | DNA polymerase III, subunit delta. | Peptidase M22, glycoprotease family. | 0.689 |
BRUM_1096 | BRUM_1099 | BRUM_1096 | BRUM_1099 | DNA polymerase III, subunit delta. | Ribosomal-protein-alanine N-acetyltransferase. | 0.679 |
BRUM_1096 | leuS | BRUM_1096 | BRUM_1093 | DNA polymerase III, subunit delta. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.651 |
BRUM_1096 | tsaD | BRUM_1096 | BRUM_1100 | DNA polymerase III, subunit delta. | Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.679 |
BRUM_1097 | BRUM_1095 | BRUM_1097 | BRUM_1095 | Putative ATP-binding protein. | ComEC/Rec2-like protein. | 0.757 |
BRUM_1097 | BRUM_1096 | BRUM_1097 | BRUM_1096 | Putative ATP-binding protein. | DNA polymerase III, subunit delta. | 0.841 |
BRUM_1097 | BRUM_1098 | BRUM_1097 | BRUM_1098 | Putative ATP-binding protein. | Peptidase M22, glycoprotease family. | 0.998 |
BRUM_1097 | BRUM_1099 | BRUM_1097 | BRUM_1099 | Putative ATP-binding protein. | Ribosomal-protein-alanine N-acetyltransferase. | 0.893 |
BRUM_1097 | BRUM_1309 | BRUM_1097 | BRUM_1309 | Putative ATP-binding protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.747 |
BRUM_1097 | BRUM_1358 | BRUM_1097 | BRUM_1358 | Putative ATP-binding protein. | Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family. | 0.916 |
BRUM_1097 | leuS | BRUM_1097 | BRUM_1093 | Putative ATP-binding protein. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.651 |
BRUM_1097 | tsaD | BRUM_1097 | BRUM_1100 | Putative ATP-binding protein. | Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.997 |
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