Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRUM_0295 | BRUM_0324 | BRUM_0295 | BRUM_0324 | Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | Hypothetical protein. | 0.709 |
BRUM_0295 | BRUM_0753 | BRUM_0295 | BRUM_0753 | Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | Hypothetical protein. | 0.739 |
BRUM_0295 | BRUM_1452 | BRUM_0295 | BRUM_1452 | Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | Acetyltransferase, GNAT family. | 0.731 |
BRUM_0295 | BRUM_1789 | BRUM_0295 | BRUM_1789 | Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | Hypothetical protein. | 0.773 |
BRUM_0295 | BRUM_1835 | BRUM_0295 | BRUM_1835 | Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | Aminoglycoside phosphotransferase. | 0.653 |
BRUM_0324 | BRUM_0295 | BRUM_0324 | BRUM_0295 | Hypothetical protein. | Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | 0.709 |
BRUM_0324 | BRUM_0753 | BRUM_0324 | BRUM_0753 | Hypothetical protein. | Hypothetical protein. | 0.774 |
BRUM_0324 | BRUM_1452 | BRUM_0324 | BRUM_1452 | Hypothetical protein. | Acetyltransferase, GNAT family. | 0.751 |
BRUM_0324 | BRUM_1789 | BRUM_0324 | BRUM_1789 | Hypothetical protein. | Hypothetical protein. | 0.766 |
BRUM_0324 | BRUM_1835 | BRUM_0324 | BRUM_1835 | Hypothetical protein. | Aminoglycoside phosphotransferase. | 0.534 |
BRUM_0753 | BRUM_0295 | BRUM_0753 | BRUM_0295 | Hypothetical protein. | Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. | 0.739 |
BRUM_0753 | BRUM_0324 | BRUM_0753 | BRUM_0324 | Hypothetical protein. | Hypothetical protein. | 0.774 |
BRUM_0753 | BRUM_1452 | BRUM_0753 | BRUM_1452 | Hypothetical protein. | Acetyltransferase, GNAT family. | 0.755 |
BRUM_0753 | BRUM_1789 | BRUM_0753 | BRUM_1789 | Hypothetical protein. | Hypothetical protein. | 0.769 |
BRUM_0753 | BRUM_1835 | BRUM_0753 | BRUM_1835 | Hypothetical protein. | Aminoglycoside phosphotransferase. | 0.568 |
BRUM_0961 | BRUM_1452 | BRUM_0961 | BRUM_1452 | Glutamate synthase subunit alpha. | Acetyltransferase, GNAT family. | 0.772 |
BRUM_0961 | gatA | BRUM_0961 | BRUM_1454 | Glutamate synthase subunit alpha. | aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.929 |
BRUM_0961 | gatB | BRUM_0961 | BRUM_1453 | Glutamate synthase subunit alpha. | aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.938 |
BRUM_0961 | guaB | BRUM_0961 | BRUM_1356 | Glutamate synthase subunit alpha. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.944 |
BRUM_1451 | BRUM_1452 | BRUM_1451 | BRUM_1452 | Hypothetical protein. | Acetyltransferase, GNAT family. | 0.841 |
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