STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRUM_2011Hypothetical protein. (136 aa)    
Predicted Functional Partners:
BRUM_1818
dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 
 0.996
BRUM_1493
UDP-glucose/GDP-mannose dehydrogenase.
  
 
 0.865
BRUM_1490
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.843
BRUM_1819
Rhamnose biosynthesis dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.843
BRUM_1251
Glycosyltransferase, group 1 family protein.
  
 
 0.724
BRUM_1376
Polysaccharide biosynthesis protein/polysaccharide flippase transporter.
  
  
 0.703
BRUM_0546
UDP-galactopyranose mutase.
  
  
 0.699
BRUM_0008
Hypothetical protein.
  
 
 0.676
BRUM_0965
Glycosyltransferase.
  
 
 0.673
BRUM_1384
Glycosyl transferase, group 1 family protein.
  
 
 0.673
Your Current Organism:
Bifidobacterium ruminantium
NCBI taxonomy Id: 78346
Other names: AS 1.2241, ATCC 49390, B. ruminantium, Bifidobacterium ruminatorum, CCUG 34975, DSM 6489, JCM 8222, LMG 12588, LMG:12588, strain Ru687
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.