STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g11918FAD-binding FR-type domain-containing protein. (578 aa)    
Predicted Functional Partners:
AK830_g1809
Uncharacterized protein.
   
 0.792
AK830_g11847
Uncharacterized protein.
   
 0.633
AK830_g6898
ANK_REP_REGION domain-containing protein.
    
 0.599
AK830_g9684
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
 0.585
AK830_g1125
Uncharacterized protein.
   
 0.524
AK830_g345
Protein phosphatase PP2A regulatory subunit A.
    
  0.459
AK830_g9623
SH3 domain-containing protein.
    
 0.453
AK830_g2775
Uncharacterized protein.
    
 0.453
AK830_g6785
Uncharacterized protein.
    
 0.453
AK830_g78
Uncharacterized protein.
    
 0.453
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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