STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g6746Uncharacterized protein. (1085 aa)    
Predicted Functional Partners:
AK830_g996
Uncharacterized protein.
   
 0.524
AK830_g12002
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.519
AK830_g4961
Uncharacterized protein.
   
 0.514
AK830_g1196
Uncharacterized protein.
   
  0.511
AK830_g10178
Uncharacterized protein.
   
 0.511
AK830_g10164
Uncharacterized protein.
   
 0.511
AK830_g7499
Uncharacterized protein.
   
  0.504
AK830_g8114
Uncharacterized protein.
   
  0.501
AK830_g9369
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
  0.501
AK830_g7070
Uncharacterized protein.
   
  0.500
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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