STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g11485Uncharacterized protein. (700 aa)    
Predicted Functional Partners:
AK830_g9189
WD_REPEATS_REGION domain-containing protein.
    
 0.614
AK830_g4139
B30.2/SPRY domain-containing protein.
    
 0.611
AK830_g11150
Uncharacterized protein.
    
  0.598
AK830_g9681
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.598
AK830_g1958
Uncharacterized protein.
    
  0.598
AK830_g6555
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.596
AK830_g12273
UBA domain-containing protein.
    
 0.591
AK830_g390
Nucleoporin.
    
 0.591
AK830_g8165
Uncharacterized protein.
  
 
  0.584
AK830_g8710
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.584
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.