STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g9737Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
AK830_g11538
Pre-mRNA-splicing factor ISY1.
   
 0.997
AK830_g6460
Pre-mRNA-splicing factor SYF1.
    
 0.997
AK830_g9889
Pre-mRNA-splicing factor slt-11.
   
 0.997
AK830_g8443
Pre-mRNA-splicing factor clf1.
    
 0.997
AK830_g2523
Pre-mRNA-processing protein 45.
    
 0.997
AK830_g8853
Uncharacterized protein.
   
 
 0.990
AK830_g6864
N-acetyltransferase domain-containing protein.
   
 
 0.989
AK830_g12630
Pre-mRNA-splicing factor cwc-24.
   
 
 0.989
AK830_g8801
Pre-mRNA-splicing factor cwc22.
   
 
 0.988
AK830_g6570
Pre-mRNA-splicing factor prp46.
   
 
 0.988
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.