STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g9600acidPPc domain-containing protein. (458 aa)    
Predicted Functional Partners:
AK830_g9255
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.676
AK830_g8010
Serine palmitoyltransferase 1.
   
 0.659
AK830_g12430
Serine palmitoyltransferase 2.
   
 0.653
AK830_g387
PKS_AT domain-containing protein.
  
 0.652
AK830_g6243
Uncharacterized protein.
  
 
 
 0.615
AK830_g8184
Uncharacterized protein.
    
   0.522
AK830_g8183
Uncharacterized protein.
    
   0.522
AK830_g5706
Uncharacterized protein.
  
 
 0.503
AK830_g12359
Lactamase_B domain-containing protein.
   
  0.502
AK830_g2527
2Fe-2S ferredoxin-type domain-containing protein.
   
  0.502
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.