STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g12239Uncharacterized protein. (994 aa)    
Predicted Functional Partners:
AK830_g6339
Uncharacterized protein.
   
 0.742
AK830_g4169
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.579
AK830_g4554
Nucleoporin NUP57.
    
 0.569
AK830_g864
1,4-alpha-glucan-branching enzyme.
    
 0.559
AK830_g8222
Chitin-binding type-4 domain-containing protein.
  
 
 0.538
AK830_g12324
Oxysterol-binding 2; Belongs to the OSBP family.
    
  0.518
AK830_g1231
Glycogen debranching enzyme.
    
 0.505
AK830_g11448
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
    
  0.470
AK830_g11701
Calnexin.
    
 
 0.463
AK830_g11861
Ribosome assembly protein 1.
   
 
  0.451
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.