STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g7768Putative aspartate-semialdehyde dehydrogenase. (362 aa)    
Predicted Functional Partners:
AK830_g4874
Putative aspartokinase.
 
 
 0.981
AK830_g4897
Aspartokinase.
 
 
 0.978
AK830_g4013
Homoserine dehydrogenase.
  
 0.964
AK830_g10069
Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.954
AK830_g4397
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.945
AK830_g12132
Acetolactate synthase small subunit, mitochondrial.
  
 
 0.944
AK830_g9357
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.938
AK830_g7727
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.927
AK830_g2882
Acetyl-CoA carboxylase.
     
 0.886
AK830_g7958
Histidine biosynthesis trifunctional protein.
  
  
 0.874
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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