Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g10644Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
AK830_g7957
Nuclear elongation and deformation protein 1.
     
  0.667
AK830_g6583
Uncharacterized protein.
     
  0.667
AK830_g10062
Long-chain-fatty-acid--CoA ligase 1.
     
  0.596
AK830_g3588
Long-chain-fatty-acid--CoA ligase 1.
     
  0.596
AK830_g11249
Long chain acyl-CoA synthetase 7, peroxisomal.
     
  0.562
AK830_g11360
Uncharacterized protein.
     
  0.562
AK830_g11248
WD_REPEATS_REGION domain-containing protein.
     
  0.562
AK830_g9938
Protein kinase domain-containing protein.
    
 0.533
AK830_g10691
O-acyltransferase.
     
  0.533
AK830_g11733
Uncharacterized protein.
     
  0.533
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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