Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AK830_g6807Glycosidase; Belongs to the glycosyl hydrolase 16 family. (373 aa)    
Predicted Functional Partners:
AK830_g11124
SUN domain-containing protein.
    
 0.549
AK830_g9417
Uncharacterized protein.
    
 0.526
AK830_g307
SCA7 domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.521
AK830_g2549
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
    
 0.519
AK830_g2263
TFIID_20kDa domain-containing protein.
    
 0.502
AK830_g3131
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.495
AK830_g2187
Uncharacterized protein.
   
 0.487
AK830_g10696
Transcription initiation factor TFIID subunit 5.
    
  0.476
AK830_g5744
Transcription initiation factor TFIID subunit 6.
    
  0.476
AK830_g7959
Uncharacterized protein.
    
  0.476
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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