close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g6807Glycosidase; Belongs to the glycosyl hydrolase 16 family. (373 aa)    
Predicted Functional Partners:
AK830_g307
SCA7 domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.522
AK830_g12179
Uncharacterized protein.
    
 0.502
AK830_g6654
Uncharacterized protein.
    
 0.502
AK830_g6248
PRK domain-containing protein.
    
 0.502
AK830_g2549
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
    
 0.501
AK830_g497
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.480
AK830_g11124
SUN domain-containing protein.
    
 0.475
AK830_g754
Uncharacterized protein.
    
 0.474
AK830_g9417
Uncharacterized protein.
    
 0.469
AK830_g2263
TFIID_20kDa domain-containing protein.
    
 0.463
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.