STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g9792C2H2-type domain-containing protein. (647 aa)    
Predicted Functional Partners:
AK830_g6621
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.940
AK830_g6611
Uncharacterized protein.
   
 0.862
AK830_g11647
Uncharacterized protein.
    
 0.839
AK830_g2856
Uncharacterized protein.
   
 0.839
AK830_g11947
Dynactin, isoform.
    
 0.833
AK830_g7488
Uncharacterized protein.
    
 0.817
AK830_g11828
Uncharacterized protein.
    
 0.813
AK830_g4968
Cytoplasmic dynein 1 intermediate chain 1.
    
 0.760
AK830_g11191
Uncharacterized protein.
    
 0.752
AK830_g11906
Dynein heavy chain, cytoplasmic.
   
 0.751
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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