STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g7702HET domain-containing protein. (679 aa)    
Predicted Functional Partners:
AK830_g5081
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.752
AK830_g8424
Uncharacterized protein.
   
 
 0.720
AK830_g11835
Eukaryotic translation initiation factor 5B.
  
  
 0.679
AK830_g10826
Translation initiation factor IF-2, mitochondrial.
  
  
 0.679
AK830_g10485
Ribosomal_L23eN domain-containing protein.
   
    0.667
AK830_g11715
rRNA biogenesis protein rrp5.
  
  
 0.661
AK830_g9900
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.647
AK830_g6462
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
 0.646
AK830_g12170
54S ribosomal protein RML2, mitochondrial.
   
   0.636
AK830_g5608
DNA-directed RNA polymerases I and III subunit RPAC1.
   
  
 0.634
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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