STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g3011ATP-dependent permease MDL1, mitochondrial. (807 aa)    
Predicted Functional Partners:
AK830_g12385
Protein disulfide-isomerase.
   
 0.853
AK830_g6296
Iron-sulfur clusters transporter ATM1, mitochondrial.
    
0.791
AK830_g10974
Uncharacterized protein.
   
 0.686
AK830_g11701
Calnexin.
    
  0.630
AK830_g6623
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
  0.617
AK830_g485
Proteasome subunit beta.
 
 
 0.592
AK830_g9927
Glucose-regulated; Belongs to the heat shock protein 70 family.
   
  0.531
AK830_g2090
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
  0.531
AK830_g7953
UDG domain-containing protein.
      
 0.524
AK830_g1881
Translation initiation factor RLI1.
      
 0.524
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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