STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g6554Ubiquitin-like domain-containing protein. (97 aa)    
Predicted Functional Partners:
AK830_g358
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.997
AK830_g12516
ULP_PROTEASE domain-containing protein.
   
 0.996
AK830_g560
ThiF domain-containing protein.
   
 0.993
AK830_g2249
Ubiquitin-activating enzyme E1-like.
   
 0.993
AK830_g11364
ULP_PROTEASE domain-containing protein.
    
 0.990
AK830_g8952
Uncharacterized protein.
    
 0.984
AK830_g9555
SP-RING-type domain-containing protein.
    
 0.981
AK830_g1015
Vezatin domain-containing protein.
   
 0.974
AK830_g1016
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.974
AK830_g1080
Ubiquitin-like domain-containing protein.
   
 0.973
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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