STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g9730Eukaryotic peptide chain release factor subunit 1. (436 aa)    
Predicted Functional Partners:
AK830_g3679
Eukaryotic peptide chain release factor GTP-binding subunit.
   
 0.998
AK830_g1881
Translation initiation factor RLI1.
   
 
 0.996
AK830_g1495
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.987
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.951
AK830_g8467
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 0.932
AK830_g6205
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.932
AK830_g348
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.929
AK830_g10485
Ribosomal_L23eN domain-containing protein.
   
  0.921
AK830_g12049
Peptidase_M24 domain-containing protein.
   
   0.921
AK830_g5362
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.921
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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