AK830_g12275 protein (Neonectria ditissima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AK830_g12275

Uncharacterized protein. (776 aa)

Predicted Functional Partners:

AK830_g9442

0.637

AK830_g8518

0.598

AK830_g11150

0.576

AK830_g9681

0.576

AK830_g1958

0.576

AK830_g12273

0.537

AK830_g2187

0.532

AK830_g6706

0.508

AK830_g12458

0.508

AK830_g4943

0.503

Your Current Organism:

Neonectria ditissima

NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AK830_g11150	AK830_g12275	A0A0P7ART1	A0A0P7B5U0	Uncharacterized protein.	Uncharacterized protein.	0.576
AK830_g11150	AK830_g12458	A0A0P7ART1	A0A0P7B3D1	Uncharacterized protein.	Glycerophosphodiester phosphodiesterase GDE1.	0.910
AK830_g11150	AK830_g1958	A0A0P7ART1	A0A0P7BTA6	Uncharacterized protein.	Uncharacterized protein.	0.869
AK830_g11150	AK830_g6706	A0A0P7ART1	A0A0N8H6T5	Uncharacterized protein.	Uncharacterized protein.	0.910
AK830_g11150	AK830_g9681	A0A0P7ART1	A0A0P7B960	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.879
AK830_g12273	AK830_g12275	A0A0N8H4T9	A0A0P7B5U0	UBA domain-containing protein.	Uncharacterized protein.	0.537
AK830_g12275	AK830_g11150	A0A0P7B5U0	A0A0P7ART1	Uncharacterized protein.	Uncharacterized protein.	0.576
AK830_g12275	AK830_g12273	A0A0P7B5U0	A0A0N8H4T9	Uncharacterized protein.	UBA domain-containing protein.	0.537
AK830_g12275	AK830_g12458	A0A0P7B5U0	A0A0P7B3D1	Uncharacterized protein.	Glycerophosphodiester phosphodiesterase GDE1.	0.508
AK830_g12275	AK830_g1958	A0A0P7B5U0	A0A0P7BTA6	Uncharacterized protein.	Uncharacterized protein.	0.576
AK830_g12275	AK830_g2187	A0A0P7B5U0	A0A0P7BG76	Uncharacterized protein.	Uncharacterized protein.	0.532
AK830_g12275	AK830_g4943	A0A0P7B5U0	A0A0P7B6Y8	Uncharacterized protein.	Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.503
AK830_g12275	AK830_g6706	A0A0P7B5U0	A0A0N8H6T5	Uncharacterized protein.	Uncharacterized protein.	0.508
AK830_g12275	AK830_g8518	A0A0P7B5U0	A0A0N8H656	Uncharacterized protein.	Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.	0.598
AK830_g12275	AK830_g9442	A0A0P7B5U0	A0A0P7B931	Uncharacterized protein.	Uncharacterized protein.	0.637
AK830_g12275	AK830_g9681	A0A0P7B5U0	A0A0P7B960	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.576
AK830_g12458	AK830_g11150	A0A0P7B3D1	A0A0P7ART1	Glycerophosphodiester phosphodiesterase GDE1.	Uncharacterized protein.	0.910
AK830_g12458	AK830_g12275	A0A0P7B3D1	A0A0P7B5U0	Glycerophosphodiester phosphodiesterase GDE1.	Uncharacterized protein.	0.508
AK830_g12458	AK830_g1958	A0A0P7B3D1	A0A0P7BTA6	Glycerophosphodiester phosphodiesterase GDE1.	Uncharacterized protein.	0.910
AK830_g12458	AK830_g2187	A0A0P7B3D1	A0A0P7BG76	Glycerophosphodiester phosphodiesterase GDE1.	Uncharacterized protein.	0.562