STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g9220D/L-glyceraldehyde reductase. (331 aa)    
Predicted Functional Partners:
AK830_g5351
Tryptophan synthase.
    
  0.794
AK830_g11934
L-threo-3-deoxy-hexylosonate aldolase; Belongs to the DapA family.
 
   
 0.739
AK830_g4488
Glutamate--cysteine ligase.
    
 0.629
AK830_g5707
Dihydroxyacetone kinase.
   
 
 0.627
AK830_g10057
Glycerol kinase 1; Belongs to the FGGY kinase family.
   
 
 0.610
AK830_g5846
L-arabinitol 4-dehydrogenase.
  
 0.608
AK830_g2734
Putative D-xylulose reductase A.
  
 0.608
AK830_g3174
NAD(P)H-dependent D-xylose reductase xyl1.
  
  
 
0.586
AK830_g12213
Dihydroxyacetone kinase 1.
   
 
 0.574
AK830_g12057
Dihydroxyacetone kinase 2.
   
 
 0.574
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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