STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g4400Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (338 aa)    
Predicted Functional Partners:
AK830_g10492
Putative C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 0.988
AK830_g9648
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.988
AK830_g9072
Uncharacterized protein.
   
 0.984
AK830_g5229
C-8 sterol isomerase.
   
 0.982
AK830_g631
Putative squalene synthase.
  
 0.974
AK830_g10797
SE domain-containing protein.
   
 0.963
AK830_g10593
Delta(24(24(1)))-sterol reductase.
   
 0.963
AK830_g2208
Squalene monooxygenase.
   
 0.963
AK830_g1180
3Beta_HSD domain-containing protein.
   
 0.959
AK830_g7078
3Beta_HSD domain-containing protein.
   
 0.959
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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