STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g9599Uncharacterized protein. (680 aa)    
Predicted Functional Partners:
AK830_g11379
Uncharacterized protein.
    
 0.604
AK830_g739
Uncharacterized protein.
    
 0.595
AK830_g1095
Crossover junction endonuclease MUS81.
    
 0.589
AK830_g5264
DNA polymerase.
   
 0.589
AK830_g8065
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.571
AK830_g1461
DNA repair protein rad16.
    
 0.555
AK830_g11367
Histone acetyltransferase type B subunit 2.
    
  0.554
AK830_g6898
ANK_REP_REGION domain-containing protein.
    
  0.537
AK830_g11446
Uncharacterized protein.
  
 
  0.524
AK830_g9411
Small nuclear ribonucleoprotein G.
    
  0.521
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.