STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g9535Brix domain-containing protein. (454 aa)    
Predicted Functional Partners:
AK830_g10823
Uncharacterized protein.
   
 
 0.990
AK830_g2526
Uncharacterized protein.
   
 
 0.990
AK830_g6445
Uncharacterized protein.
   
   0.989
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.989
AK830_g10505
ATP-dependent RNA helicase DRS1; Belongs to the DEAD box helicase family.
   
   0.986
AK830_g9399
Uncharacterized protein.
   
 
 0.985
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.985
AK830_g3493
Brix domain-containing protein.
   
 
 0.984
AK830_g8947
Putative RNA-binding protein C4F6.14.
   
   0.980
AK830_g4932
Uncharacterized protein.
   
 
 0.979
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
Server load: low (24%) [HD]