STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g7439HMG box domain-containing protein. (191 aa)    
Predicted Functional Partners:
AK830_g12385
Protein disulfide-isomerase.
    
   0.839
AK830_g638
HTH araC/xylS-type domain-containing protein.
    
 0.709
AK830_g12179
Uncharacterized protein.
    
 0.633
AK830_g6654
Uncharacterized protein.
    
 0.633
AK830_g6248
PRK domain-containing protein.
    
 0.633
AK830_g1686
HMG box domain-containing protein.
    
 0.631
AK830_g358
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.607
AK830_g5691
Uncharacterized protein.
    
 0.599
AK830_g4159
Uncharacterized protein.
    
 0.599
AK830_g9318
Uncharacterized protein.
    
 0.599
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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