STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g8885FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. (591 aa)    
Predicted Functional Partners:
AK830_g11839
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.801
AK830_g3401
FAD-binding PCMH-type domain-containing protein.
  
 
  0.622
AK830_g5351
Tryptophan synthase.
    
 0.563
AK830_g11743
3'-5' exonuclease domain-containing protein.
    
  0.536
AK830_g12359
Lactamase_B domain-containing protein.
  
 0.530
AK830_g10797
SE domain-containing protein.
   
 0.530
AK830_g2208
Squalene monooxygenase.
   
 0.530
AK830_g2527
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.530
AK830_g9332
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.524
AK830_g10715
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.519
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.