STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g8728Uncharacterized protein. (1060 aa)    
Predicted Functional Partners:
AK830_g12229
Uncharacterized protein.
   
 
 0.816
AK830_g3958
J domain-containing protein.
    
 
 0.816
AK830_g7093
Uncharacterized protein.
    
 
 0.816
AK830_g10136
Uncharacterized protein.
    
 
 0.810
AK830_g5740
Protein transport protein SEC61 subunit alpha.
    
 
 0.755
AK830_g5373
Conidiophore development protein hymA.
   
 0.724
AK830_g3169
Uncharacterized protein.
    
 
 0.636
AK830_g5666
Uncharacterized protein.
    
 
 0.591
AK830_g8206
AMPKBI domain-containing protein.
     
 0.434
AK830_g1965
AMPK1_CBM domain-containing protein.
     
 0.434
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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