STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g7559Multidrug resistance protein 1. (1298 aa)    
Predicted Functional Partners:
AK830_g2882
Acetyl-CoA carboxylase.
   
 0.671
AK830_g7442
Endocytosis protein end4.
    
 0.583
AK830_g7960
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
 0.555
AK830_g7094
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 0.520
AK830_g7586
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
  0.508
AK830_g2170
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
  0.500
AK830_g6898
ANK_REP_REGION domain-containing protein.
    
 0.498
AK830_g11898
USP domain-containing protein.
    
  0.484
AK830_g7513
Ubiquitin carboxyl-terminal hydrolase.
    
  0.484
AK830_g1085
VWFA domain-containing protein.
    
  0.483
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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