STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g8295Uncharacterized protein. (732 aa)    
Predicted Functional Partners:
AK830_g9900
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
  0.873
AK830_g10174
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.842
AK830_g12496
Rhodanese domain-containing protein.
  
 
 0.836
AK830_g3205
Uncharacterized protein.
   
 
 0.836
AK830_g11682
Uncharacterized protein.
  
 
 0.834
AK830_g7682
Uncharacterized protein.
   
   0.832
AK830_g3079
MRP-L46 domain-containing protein.
   
 
 0.830
AK830_g6397
Uncharacterized protein.
  
 
 0.822
AK830_g1875
Uncharacterized protein.
   
   0.812
AK830_g9829
L51_S25_CI-B8 domain-containing protein.
   
   0.800
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.