STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g4894Uncharacterized protein. (610 aa)    
Predicted Functional Partners:
AK830_g1428
Protein kinase domain-containing protein.
    
 0.975
AK830_g897
Uncharacterized protein.
    
 0.945
AK830_g10738
PPM-type phosphatase domain-containing protein.
   
 0.921
AK830_g719
MADS-box domain-containing protein.
    
 0.908
AK830_g11402
BZIP domain-containing protein.
    
 0.903
AK830_g12349
Uncharacterized protein.
    
 0.903
AK830_g10088
Serine/threonine-protein kinase srk1.
    
 0.881
AK830_g3436
Protein kinase domain-containing protein.
    
 0.873
AK830_g12341
Response regulatory domain-containing protein.
    
 0.867
AK830_g8641
GCR1_C domain-containing protein.
    
 0.853
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.