STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g7604Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
AK830_g11367
Histone acetyltransferase type B subunit 2.
    
 0.970
AK830_g10083
Histone deacetylase RPD3.
    
 0.951
AK830_g6588
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.951
AK830_g10117
Chromatin remodeling factor mit1.
    
 0.897
AK830_g2745
Uncharacterized protein.
    
 0.897
AK830_g852
Histone deacetylase clr3.
    
 0.858
AK830_g479
Hist_deacetyl domain-containing protein.
    
 0.858
AK830_g6922
Uncharacterized protein.
    
 0.749
AK830_g11524
Switch 2.
    
 0.744
AK830_g6927
DNA repair protein rhp26.
    
 0.744
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.