STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g3896Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
AK830_g7421
GTP-binding protein ypt1.
   
   0.605
AK830_g1603
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.604
AK830_g964
Uncharacterized protein.
   
   0.557
AK830_g3126
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
   0.549
AK830_g6614
Adenylate cyclase.
   
 0.514
AK830_g9332
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.477
AK830_g12264
Putative gamma-glutamyl phosphate reductase.
    
 0.472
AK830_g3875
Zn(2)-C6 fungal-type domain-containing protein.
  
 
 0.436
AK830_g85
AflR domain-containing protein.
  
 
 0.436
AK830_g11674
Putative transporter.
     
 0.418
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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