STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g476Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
AK830_g4912
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
  0.845
AK830_g2937
S4 RNA-binding domain-containing protein.
   
  0.845
AK830_g9129
Uncharacterized protein.
   
 0.810
AK830_g5576
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.808
AK830_g9371
S10_plectin domain-containing protein.
   
 0.804
AK830_g3711
Ribosomal_S7 domain-containing protein.
   
 0.804
AK830_g348
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.804
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.802
AK830_g2857
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.802
AK830_g7968
Uncharacterized protein.
   
  0.801
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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