STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g3250Uncharacterized protein. (384 aa)    
Predicted Functional Partners:
AK830_g1809
Uncharacterized protein.
    
 0.846
AK830_g11839
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.792
AK830_g286
Protein VTS1.
    
 0.586
AK830_g10117
Chromatin remodeling factor mit1.
    
 0.574
AK830_g11949
DNA helicase; Belongs to the RuvB family.
    
  0.567
AK830_g1120
YTH domain-containing protein.
    
  0.563
AK830_g7095
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.562
AK830_g9939
Uncharacterized protein.
    
  0.561
AK830_g9683
Uncharacterized protein.
    
 0.560
AK830_g2606
Uncharacterized protein.
  
 
   0.560
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.