STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK830_g112Amidohydro-rel domain-containing protein. (515 aa)    
Predicted Functional Partners:
AK830_g3978
Phenylalanine ammonia-lyase.
  
 
 0.716
AK830_g5626
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
    
 0.707
AK830_g3227
Xanthine dehydrogenase.
  
 
 0.690
AK830_g1205
DHO_dh domain-containing protein.
  
 
 0.657
AK830_g9426
Pribosyltran domain-containing protein.
     
 0.644
AK830_g10947
IU_nuc_hydro domain-containing protein.
  
 
 0.621
AK830_g11002
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 
  0.569
AK830_g4492
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
   
  0.568
AK830_g8650
Pribosyltran domain-containing protein.
    
 0.565
AK830_g9334
NADH-ubiquinone oxidoreductase subunit, mitochondrial.
    
 0.564
Your Current Organism:
Neonectria ditissima
NCBI taxonomy Id: 78410
Other names: Cylindrocarpon willkommii, N. ditissima, Nectria ditissima
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